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Data released on November 12, 2011

Genome data from the Florida carpenter ant (Camponotus floridanus).

Berger, S, L; Bonasio, R; Donahue, G; Fang, X; Huang, Z; Li, C; Li, Q; Liebig, J; Mutti, N, S; Qin, N; Reinberg, D; Wang, J; Yang, P; Ye, C; Zhang, G; Zhang, P (2011): Genome data from the Florida carpenter ant (Camponotus floridanus). GigaScience. http://dx.doi.org/10.5524/100018 RIS BibTeX Text

Here we present the sequenced genome of the Florida carpenter ant (Camponotus floridanus), a species with an organized caste society. As an eusocial species, its genome offers interesting insights into aging, epigenetics and animal behavior. The Illumina Genome Analyzer platform was used to sequence a genomic library of the Florida carpenter ant, obtaining more than 100-fold coverage. The draft genomic assembly reached a scaffold N50 size of ~600 Kb and covers more than 90% of the approximately 240 Mb genome.

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Related manuscripts:

doi:10.1126/science.1192428 (PubMed: 20798317)

Accessions (data included in GigaDB):

GENBANK: AEAB00000000
BioProject: PRJNA50201

Accessions (data not in GigaDB):

SRA: SRP002786
GEO: GSE22680

Genomic

http://gigadb.org/images/data/cropped/100018_Camponotus.jpg

Samples: Table Settings

Columns:

Common Name
Scienfic Name
Sample Attributes
Taxonomic ID
Genbank Name

Sample IDTaxonomic IDCommon NameGenbank NameScientific NameSample Attributes
Cflo104421Florida carpenter antFlorida carpenter antCamponotus floridanus
Displaying 1-1 of 1 Sample(s).

Files: (FTP site) Table Settings

Columns:

File Description
Sample ID
File Type
File Format
Size
Release Date
Download Link
File Attributes

File NameSample IDFile TypeFile FormatSizeRelease Date 
CfloCoding sequenceFASTA6.41 MB2011-11-12
CfloSequence assemblyFASTA61.98 MB2011-11-12
CfloAnnotationGFF1.1 MB2011-11-12
CfloProtein sequenceFASTA4.16 MB2011-11-12
ReadmeTEXT0.23 KB2011-11-12
Displaying 1-5 of 5 File(s).

History:

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