http://gigadb.org/images/data/cropped/100019_Harpegnathos_saltator.jpg

Genome data from Jerdon’s jumping ant (Harpegnathos saltator).

Dataset type: Genomic
Data released on November 12, 2011

Bonasio R; Zhang G; Ye C; Mutti NS; Fang X; Qin N; Donahue G; Yang P; Li Q; Li C; Zhang P; Huang Z; Berger SL; Reinberg D; Wang J; Liebig J (2011): Genome data from Jerdon’s jumping ant (Harpegnathos saltator). GigaScience. http://dx.doi.org/10.5524/100019

DOI10.5524/100019

Presented here is the sequenced genome of Jerdon’s jumping ant (Harpegnathos saltator). The jumping ant has a distinct caste and social behavior system, and its genome offers interesting insights into epigenetics in aging and behavior. The Illumina Genome Analyzer platform was used to sequence a genomic library, obtaining more than 100-fold coverage of the estimated 330 Mb genome. The draft genomic assembly reached a scaffold N50 size of ~600 kb and covers more than 90% of the ant’s genome.

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Additional details

Read the peer-reviewed publication(s):

(PubMed: 20798317)

Accessions (data generated as part of this study):

GENBANK: AEAC00000000
BioProject: PRJNA50203

Accessions (data referenced by this study):

SRA: SRP002786
GEO: GSE22680





Sample IDTaxonomic IDCommon NameGenbank NameScientific NameSample Attributes
Hsal610380Jerdon's jumping antJerdon's jumping antHarpegnathos saltator
Displaying 1-1 of 1 Sample(s).




File NameSample IDData TypeFile FormatSizeRelease Date 
HsalCoding sequenceFASTA6.3 MB2011-11-12
HsalSequence assemblyFASTA78.4 MB2011-11-12
HsalAnnotationGFF1.07 MB2011-11-12
HsalProtein sequenceFASTA4.08 MB2011-11-12
HsalReadmeTEXT0.23 KB2011-11-12
Displaying 1-5 of 5 File(s).
Date Action
October 17, 2015 File Hsal.v3.3.cds.gz updated

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