Genome data from the Tibetan antelope (Pantholops hodgsonii).

Dataset type: Genomic
Data released on November 12, 2011

Ge R; Cai Q; Shen Y; Asan ; Ma L; Zhang Y; Yi X; Chen Y; Yang L; Huang Y; Wang B; Ou X; Xu J; Zhang Y; Wu K; Geng C; Zhang G; Wang J; Zhang Y; Wang J (2011): Genome data from the Tibetan antelope (Pantholops hodgsonii). GigaScience. http://dx.doi.org/10.5524/100027

DOI10.5524/100027

The Tibetan antelope (Pantholops hodgsonii) is a native of the high mountain steppes and semi-desert areas of the Tibetan plateau. It is a medium sized antelope that displays both migratory and herd behavior. Of interest, it is the only member of the genus Pantholops. The Tibetan antelope are listed as an endangered species, which is due to commercial poaching for their fine underwool, competition with local domesticated herds, and commercial development of their range land. The genome of the Tibetan antelope was sequenced using Illumina GA sequencing technology. Genome assembly and annotation was also completed. The data here can be used for understanding the unique adaptations this animal has for surviving in its extreme high-altitude and as a model for investigating specific genetic mechanisms and the biology of other ruminant species.

Additional details

Read the peer-reviewed publication(s):

Ge, R.-L., Cai, Q., Shen, Y.-Y., San, A., Ma, L., Zhang, Y., … Wang, J. (2013). Draft genome sequence of the Tibetan antelope. Nature Communications, 4(1). doi:10.1038/ncomms2860 (PubMed: 23673643)

Accessions (data generated as part of this study):

GENBANK: AGTT01000000

Projects:






Sample IDTaxonomic IDCommon NameGenbank NameScientific NameSample Attributes
PHO59538Tibetan antelopechiruPantholops hodgsonii Description:Genomic DNA extracted from a male Tibetan Antelope at Kekexili National Nature Reserve, Qinghai-Tibetan Plateau.
Geographic location (country and/or sea,region):Tibet
Sex:male
Displaying 1-1 of 1 Sample(s).




File NameSample IDData TypeFile FormatSizeRelease Date 
Genome sequenceFASTQ1017.97 MB2011-11-12
Genome sequenceFASTQ1006.99 MB2011-11-12
PHOImagePNG15.02 KB2011-11-12
PHOImagePNG12.99 KB2011-11-12
Genome sequenceFASTQ925.38 MB2011-11-12
Genome sequenceFASTQ1.26 GB2011-11-12
PHOImagePNG20.27 KB2011-11-12
PHOImagePNG12.66 KB2011-11-12
Genome sequenceFASTQ905.65 MB2011-11-12
Genome sequenceFASTQ1.22 GB2011-11-12
Displaying 1-10 of 469 File(s).
Date Action
October 22, 2015 File 090625_I354_FC427HWAAXX_L7_PHOlcpDAADEDAPE_1.fq.gz updated