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Data released on June 09, 2015

Supporting materials for "SOAPdenovo2 Case Study".

Avila-Garcia, M, S; Edmunds, S; Gonzalez-Beltran, A; Lam, T; Lee, T; Li, P; Luo, R; Rocca-Serra, P; Roos, M; Sansone, S; Thompson, M; Zhao, J (2015): Supporting materials for "SOAPdenovo2 Case Study". GigaScience Database. RIS BibTeX Text

The SOAPdenovo2 case study is a reproducibility study aimed at exploring how existing research objects and workflow enactment engines can help assess, record and preserve scientific workflows and associated findings by reviewing a comparison between sequence assembly algorithm performance in the light of development of the SOAPdenovo2 de novo genome assembler. The case study was a joint effort by the GigaScience journal, the Investigation/Study/Assay (ISA) infrastructure, Nanopublication (Nanopub) and Research Object (RO) communities and SOAPdenovo2 de novo genome assembler developers. Included here are the relevant ISA-TAB, linkedISA, nanopubs and Research Object files. For more see the paper and GitHub page.

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doi:10.5524/100148 IsNewVersionOf doi:10.5524/100044

Additional information:


Galaxy workflows reproducible education ISA-Tab 

Software, Workflow

Files: (FTP site) Table Settings


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File NameSample IDFile TypeFile FormatSizeRelease Date 
OtherTAR51.84 KB2015-05-22
ReadmeTEXT0.59 KB2015-05-22
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