Micro-computed tomography scans and virtual histological slides of a recently described land planarian species of Obama otavioi (Platyhelminthes).
Dataset type: Imaging
Data released on March 01, 2016
Carbayo F; Lenihan JW (2016): Micro-computed tomography scans and virtual histological slides of a recently described land planarian species of Obama otavioi (Platyhelminthes). GigaScience Database. http://dx.doi.org/10.5524/100190
We investigated whether images obtained through X-ray micro-computed tomography (μCT), can be used in conjunction with traditional methods for morphological studies of soft-bodied land planarians. Among its virtues, μCT is non-invasive and provides true to scale three-dimensional imagery at high resolution. We compared these μCT-based images with those obtained from light microphotography of histological sections, most of which were also digitizseddigitized at high magnification. The specimens studied were collected in 2012. Subsequent μCT-based images of the stained body of a paratype show nearly all morphological features provided by traditional histology, with the exception of structures particularly minute, 5 μm, such as the sensory pits and single muscle fibers, which are best visible on traditional histological sections. Since the technique is non-destructive, the scanned specimen is preserved without damage. The raw and derivative µCT data and virtual histological sections can be found here.
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Sample ID | Taxonomic ID | Common Name | Genbank Name | Scientific Name | Sample Attributes |
---|---|---|---|---|---|
MCZ 59100 | 1336495 | Obama sp. | Obama sp. | Geographic location (country and/or sea,region):Re... Collection date:22 / Sept / 2012. Alternative names:Paratype; F5434 ... + | |
MZUSP PL 1573 | 1336495 | Obama sp. | Obama sp. | Geographic location (country and/or sea,region):Re... Collection date:22 / Sept / 2012. Alternative names:Paratype; F5435 ... + | |
MZUSP PL 1574 | 1336495 | Obama sp. | Obama sp. | Geographic location (country and/or sea,region):Re... Collection date:22 / Sept / 2012. Alternative names:Holotype; F5470 ... + |