Supporting data for "The Healthy Brain Network Serial Scanning Initiative"

Dataset type: Imaging
Data released on December 31, 2016

O’Connor D; Potler NV; Kovacs M; Xu T; Ai L; Pellman J; Vanderwal T; Parra L; Cohen S; Ghosh S; Escalera J; Grant-Villegas N; Osman Y; Bui A; Craddock RC; Milham MP (2016): Supporting data for "The Healthy Brain Network Serial Scanning Initiative" GigaScience Database. http://dx.doi.org/10.5524/100259

DOI10.5524/100259

Although typically measured during the resting state, a growing literature is illustrating the ability to map intrinsic connectivity in task and naturalistic viewing fMRI paradigms. These paradigms are drawing excitement due to their greater tolerability in clinical and developing populations and because they enable a wider range of analyses (e.g. inter-subject correlations). To be clinically useful, the test-retest reliability of connectivity measured during these paradigms needs to be established. This resource provides data for evaluating test-retest reliability for full-brain connectivity patterns detected during each of four scan conditions that differ with respect to level of engagement (rest, abstract animations, movie clips, flanker task). Data is provided for thirteen participants, each scanned in twelve sessions with 10 minutes for each scan of the four conditions. Diffusion kurtosis imaging data was also obtained at each session.
Technical validation and demonstrative reliability analyses were carried out at the connection-level using the Intraclass Correlation Coefficient (ICC), and at network level representations of the data using the Image Intraclass Correlation Coefficient (I2C2). Variation in intrinsic functional connectivity across sessions was generally found to be greater than that attributable to scan condition. Between-condition reliability was generally high, particularly for the frontoparietal and default networks. Between-session reliabilities obtained separately for the different scan conditions were comparable, though notably lower than between-condition reliabilities.
The described resource provides a test-bed for quantifying the reliability of connectivity indices across conditions and time. The resource can be used to compare and optimize different frameworks for measuring connectivity and data collection parameters such as scan length. Additionally, investigators can explore the unique perspectives of the brain’s functional architecture offered by each of the scan conditions.

Funding
The Healthy Brain Network and its supporting initiatives are supported by philanthropic contributions from the following individuals, foundations and organizations: Lee Alexander, Lee Alexander, Robert Allard, Lisa Bilotti Foundation, Inc., Margaret Billoti, Christopher Boles, Brooklyn Nets, Agapi and Bruce Burkhard, Randolph Cowen and Phyllis Green, Elizabeth and David DePaolo, Charlotte Ford, Valesca Guerrand-Hermes, Sarah and Geoffrey Gund, George Hall, Joseph Healey and Elaine Thomas, Hearst Foundations, Anton and Robin Katz, Rachael and Marshall Levine, Ke Li, Jessica Lupovici, Javier Macaya, Christine and Richard Mack, Susan Miller and Byron Grote, John and Amy Phelan, Linnea and George Roberts, Jim and Linda , Robinson Foundation, Inc, Caren and Barry Roseman, Zibby Schwarzman, David Shapiro and Abby Pogrebin, Stavros Niarchos Foundation, Nicholas Van Dusen, David Wolkoff and Stephanie Winston Wolkoff and the Donors to the Brant Art Auction of 2012.

Additional details

Read the peer-reviewed publication(s):



Additional information:

http://fcon_1000.projects.nitrc.org/indi/hbn_ssi/





Sample IDTaxonomic IDCommon NameGenbank NameScientific NameSample Attributes
311219606HumanhumanHomo sapiens Description:e.g. 24 yr old, right handed male, sub...
Sex:male [PATO:0000384]
Age:24
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311229606HumanhumanHomo sapiens Description:e.g. 33 yr old, right handed female, s...
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Sex:male [PATO:0000384]
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Sex:female [PATO:0000383]
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Sex:male [PATO:0000384]
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Sex:female [PATO:0000383]
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311299606HumanhumanHomo sapiens Description:e.g. 42 yr old, right handed male, sub...
Sex:male [PATO:0000384]
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311309606HumanhumanHomo sapiens Description:e.g. 33 yr old, right handed female, s...
Sex:female [PATO:0000383]
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Displaying 1-10 of 13 Sample(s).




File NameSample IDData TypeFile FormatSizeRelease Date 
CSVCSV9.49 KB2016-12-31
TextDOCX47.72 KB2016-12-21
SpreadsheetUNKNOWN2.29 KB2016-12-21
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textfileTEXT7.94 KB2016-12-21
textfileTEXT8.12 KB2016-12-21
textfileTEXT7.83 KB2016-12-21
Archive of Stimuli ImagesTAR43.18 KB2016-12-21
Zip of spreadsheetsarchive5.34 KB2016-12-21
VideoUNKNOWN767.81 MB2016-12-21
Displaying 1-10 of 65 File(s).

Protocols.io:

Date Action
December 31, 2016 Dataset publish
January 9, 2017 External Link added : http://doi.org/0.17504/protocols.io.gxcbxiw
January 17, 2017 External Link updated : http://doi.org/10.17504/protocols.io.gxcbxiw
March 6, 2017 Manuscript Link added : 10.1093/gigascience/giw011
March 6, 2017 Manuscript Link added : 10.1093/gigascience/giw011
December 6, 2018 File CMI_Biobank_DUA.docx updated