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Data released on May 14, 2014

Genomic data of the Northern Fulmar (Fulmarus glacialis).

Gilbert, M, P; Jarvis, E, D; Li, B; Li, C; The Avian Genome Consortium, ; Wang, J; Zhang, G (2014): Genomic data of the Northern Fulmar (Fulmarus glacialis). GigaScience Database. http://dx.doi.org/10.5524/101025 RIS BibTeX Text

The Northern Fulmar (Fulmarus glacialis glacialis (Linnaeus, 1761)), also known as Fulmar or Arctic Fulmar, is a highly abundant sea bird and commonly found in north Pacific and north Atlantic subarctic regions. It is a member of the Procellariidae family, which include petrels and shearwaters, and like other petrels, the Northern Fulmar's walking ability is limited but is a very a strong flier.
These data have been produced as part of the Avian Phylogenomics Project. DNA was collected from a vouchered sample (137838) of Natural History Museum of Denmark from a male caught in Denmark. We sequenced the genome to a depth of approximately 33X.
The assembled scaffolds of high quality sequences total 1.14Gb, with the contig and scaffold N50 values of 17kb and 46kb respectively. We identified 14,306 protein-coding genes with a mean length of 12.8kb.

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Related manuscripts:

doi:10.1186/2047-217X-3-26
doi:10.1126/science.1251385
doi:10.1126/science.1253451

Related datasets:

doi:10.5524/101025 IsSupplementTo doi:10.5524/101000

Accessions (data included in GigaDB):

BioProject: PRJNA212894
SRA: SRP029180

Projects:



Genomic

http://gigadb.org/images/data/cropped/bird/fulmarus_glacialis.png

Samples: Table Settings

Columns:

Common Name
Scienfic Name
Sample Attributes
Taxonomic ID
Genbank Name

Sample IDTaxonomic IDCommon NameGenbank NameScientific NameSample Attributes
Northern Fulmar -TG1130455Northern FulmarNorthern FulmarFulmarus glacialis Source material identifiers:Tom Gilbert
Estimated genome size:unknown size
Funding source:BGI
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Displaying 1-1 of 1 Sample(s).

Files: (FTP site) Table Settings

Columns:

File Description
Sample ID
File Type
File Format
Size
Release Date
Download Link
File Attributes

File NameSample IDFile TypeFile FormatSizeRelease Date 
Northern Fulmar -TG11Coding sequenceFASTA5.38 MB2014-02-07
Northern Fulmar -TG11Sequence assemblyFASTA342.07 MB2014-02-07
Northern Fulmar -TG11AnnotationGFF1.32 MB2014-02-07
Northern Fulmar -TG11Protein sequenceFASTA3.5 MB2014-02-07
Northern Fulmar -TG11Repeat sequenceUNKNOWN5.66 MB2014-02-07
Displaying 1-5 of 5 File(s).

History:

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