Dryas drummondii (D. drummondii) is a nodulating species belonging to the Rosales order. It is nodulated by Frankia bacteria. DNA was collected from leaves of different plants grown in the greenhouse. We sequenced the genome to a depth of approximately 777X. The assembled scaffolds of high quality sequences total 233MB, with the contig and scaffold N50 values of 35kb and 979kb respectively. We identified 25,030 protein-coding genes with a mean length of 1.350kb.


Additional details

Read the peer-reviewed publication(s):

Griesmann, M., Chang, Y., Liu, X., Song, Y., Haberer, G., Crook, M. B., … Cheng, S. (2018). Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis. Science, eaat1743. doi:10.1126/science.aat1743

Related datasets:

doi:10.5524/101047 IsSupplementTo doi:10.5524/100300

Accessions (data generated as part of this study):

BioProject: PRJNA374770


Sample IDTaxonomic IDCommon NameGenbank NameScientific NameSample Attributes
Dryas_drummondii genome48231  Dryas drummondii Description:DNA extracted from seeds of Dryas drum...
Analyte type:DNA
Project name:International Consortium on Evolution...
Dryas_drummondii RNA48231  Dryas drummondii Description:RNA extracted from leaf of Dryas drumm...
Analyte type:RNA
Project name:International Consortium on Evolution...
Displaying 1-2 of 2 Sample(s).

File NameSample IDData TypeFile FormatSizeRelease Date 
Dryas_drummondii RNACoding sequenceFASTA33.27 MB2018-06-01
otherFASTA2.15 MB2018-06-01
otherGFF692.72 KB2018-06-01
otherFASTA764.06 KB2018-06-01
otherFASTA285.33 KB2018-06-01
Dryas_drummondii RNAAnnotationGFF9.38 MB2018-06-01
Dryas_drummondii RNAProtein sequenceFASTA11.32 MB2018-06-01
otherFASTA3.11 MB2018-06-01
Dryas_drummondii RNAAnnotationGFF32.88 MB2018-06-01
Dryas_drummondii RNASequence assemblyFASTA222.32 MB2018-06-01
Displaying 1-10 of 11 File(s).
Date Action
July 23, 2018 Dataset publish
February 6, 2019 Manuscript Link added : 10.1126/science.aat1743