| Ambystoma_mexicanum_adult | 8296 | axolotl | axolotl | Ambystoma mexicanum | Description:MicroCT image data (volumetric DICOM s...
Geographic location (country and/or sea,region):It...
Geographic location (latitude):45.64348
...
Description:MicroCT image data (volumetric DICOM stack) and surface-rendered 3D reconstructions (STL format) of adult Ambystoma mexicanum
Geographic location (country and/or sea,region):Italy: Trieste, Speleovivarium Erwin Pichl
Geographic location (latitude):45.64348
Geographic location (longitude):13.75695
Life stage:adult
Age:5 years
Sex:female
Broad-scale environmental context:urban biome [ENVO:01000249]
Local environmental context:animal house [ENVO:00003040]
Sample source:Speleovivarium Erwin Pichl, Italy
Sample material processing:Specimens were stored in 75% ethanol. Adult samples were stained with contrast agent 2% iodine in 90% methanol for six weeks.
Tissue:Head [UBERON:0000033]
Collection date:2009
Exp-Scan method:MicroCT
Exp-Scanner:GE Phoenix v|tome|x L 240
Exp-Scan parameters:Acceleration voltage of the X-ray tube 80 kV; Tube current 250 μA; Exposure time 900 ms; 2000 images
Exp-Scan resolution:27.5 µm (isotropic)
Comment:The approval for the capture, handling, maintenance and breeding in captivity of the animals used in the study was granted by the Ministry of the Environment and Spatial Planning of the Republic of Slovenia, Slovenian Agency for the Environment (Permits nos. 35701-36/01, 35601-95/2009-4 and 35601-132/2014-4), by the Italian Republic, Friuli Venezia Giulia Region (Permit nos. 4105/6MU4/95/04/12), and by the Italian Republic, Ministry of Ecological Transition (Permits nos. 3006/015590-93, 39/04). No animals were sacrificed for this study.
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| Ambystoma_mexicanum_larvae | 8296 | axolotl | axolotl | Ambystoma mexicanum | Description:MicroCT image data (volumetric DICOM s...
Geographic location (country and/or sea,region):It...
Geographic location (latitude):45.64348
...
Description:MicroCT image data (volumetric DICOM stack) and surface-rendered 3D reconstructions (STL format) of larval Ambystoma mexicanum
Geographic location (country and/or sea,region):Italy: Trieste, Speleovivarium Erwin Pichl
Geographic location (latitude):45.64348
Geographic location (longitude):13.75695
Life stage:larva
Age:6 days
Sex:unknown
Broad-scale environmental context:urban biome [ENVO:01000249]
Local environmental context:animal house [ENVO:00003040]
Sample source:Speleovivarium Erwin Pichl, Italy
Sample material processing:Specimens were stored in 75% ethanol. Larval and juvenile samples were stained with contrast agent 1% phosphotungstic acid (PTA) in 90% methanol for seven weeks.
Tissue:Head [UBERON:0000033]
Collection date:2012
Exp-Scan method:MicroCT
Exp-Scanner:GE Phoenix v|tome|x L 240
Exp-Scan parameters:Acceleration voltage of the X-ray tube 60 kV; Tube current 200 μA; Exposure time 900 ms; 2000 images
Exp-Scan resolution:2.8 µm (isotropic)
Comment:The approval for the capture, handling, maintenance and breeding in captivity of the animals used in the study was granted by the Ministry of the Environment and Spatial Planning of the Republic of Slovenia, Slovenian Agency for the Environment (Permits nos. 35701-36/01, 35601-95/2009-4 and 35601-132/2014-4), by the Italian Republic, Friuli Venezia Giulia Region (Permit nos. 4105/6MU4/95/04/12), and by the Italian Republic, Ministry of Ecological Transition (Permits nos. 3006/015590-93, 39/04). No animals were sacrificed for this study.
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| Proteus_anguinus_adult | 221568 | blind cave salamander | olm | Proteus anguinus | Description:MicroCT image data (volumetric DICOM s...
Geographic location (country and/or sea,region):Sl...
Geographic location (latitude):45.82137
...
Description:MicroCT image data (volumetric DICOM stack) and surface-rendered 3D reconstructions (STL format) of adult Proteus anguinus
Geographic location (country and/or sea,region):Slovenia: Postojna-Planina Cave System
Geographic location (latitude):45.82137
Geographic location (longitude):14.24659
Life stage:adult
Age:not provided
Sex:unknown
Broad-scale environmental context:mediterranean biome [ENVO:01001833]
Local environmental context:cave [ENVO:00000067]
Sample source:Speleovivarium Erwin Pichl, Italy
Sample material processing:Specimens were stored in 75% ethanol. Adult samples were stained with contrast agent 2% iodine in 90% methanol for six weeks.
Tissue:Head [UBERON:0000033]
Collection date:1999
Exp-Scan method:MicroCT
Exp-Scanner:GE Phoenix v|tome|x L 240
Exp-Scan parameters:Acceleration voltage of the X-ray tube 80 kV; Tube current 250 μA; Exposure time 900 ms; 2000 images
Exp-Scan resolution:25 µm (isotropic)
Comment:The approval for the capture, handling, maintenance and breeding in captivity of the animals used in the study was granted by the Ministry of the Environment and Spatial Planning of the Republic of Slovenia, Slovenian Agency for the Environment (Permits nos. 35701-36/01, 35601-95/2009-4 and 35601-132/2014-4), by the Italian Republic, Friuli Venezia Giulia Region (Permit nos. 4105/6MU4/95/04/12), and by the Italian Republic, Ministry of Ecological Transition (Permits nos. 3006/015590-93, 39/04). No animals were sacrificed for this study.
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| Proteus_anguinus_juvenile | 221568 | blind cave salamander | olm | Proteus anguinus | Description:MicroCT image data (volumetric DICOM s...
Geographic location (country and/or sea,region):Cr...
Geographic location (latitude):43.02
...
Description:MicroCT image data (volumetric DICOM stack) and surface-rendered 3D reconstructions (STL format) of juvenile Proteus anguinus
Geographic location (country and/or sea,region):Croatia: Metković
Geographic location (latitude):43.02
Geographic location (longitude):17.59
Life stage:juvenile
Age:not provided
Sex:unknown
Broad-scale environmental context:mediterranean biome [ENVO:01001833]
Local environmental context:spring [ENVO:00000027]
Sample source:Department of Biology, Biotechnical Faculty, University of Ljubljana, Slovenia
Sample material processing:Specimens were stored in 75% ethanol. Larval and juvenile samples were stained with contrast agent 1% phosphotungstic acid (PTA) in 90% methanol for seven weeks.
Tissue:Head [UBERON:0000033]
Collection date:not provided
Exp-Scan method:MicroCT
Exp-Scanner:GE Phoenix v|tome|x L 240
Exp-Scan parameters:Acceleration voltage of the X-ray tube 60 kV; Tube current 200 μA; Exposure time 900 ms; 2000 images
Exp-Scan resolution:3.5 µm (isotropic)
Comment:The approval for the capture, handling, maintenance and breeding in captivity of the animals used in the study was granted by the Ministry of the Environment and Spatial Planning of the Republic of Slovenia, Slovenian Agency for the Environment (Permits nos. 35701-36/01, 35601-95/2009-4 and 35601-132/2014-4), by the Italian Republic, Friuli Venezia Giulia Region (Permit nos. 4105/6MU4/95/04/12), and by the Italian Republic, Ministry of Ecological Transition (Permits nos. 3006/015590-93, 39/04). No animals were sacrificed for this study.
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| Proteus_anguinus_larvae | 221568 | blind cave salamander | olm | Proteus anguinus | Description:MicroCT image data (volumetric DICOM s...
Geographic location (country and/or sea,region):Sl...
Geographic location (latitude):45.82137
...
Description:MicroCT image data (volumetric DICOM stack) and surface-rendered 3D reconstructions (STL format) of larval Proteus anguinus
Geographic location (country and/or sea,region):Slovenia: Postojna-Planina Cave System
Geographic location (latitude):45.82137
Geographic location (longitude):14.24659
Life stage:larva
Age:3 weeks
Sex:unknown
Broad-scale environmental context:mediterranean biome [ENVO:01001833]
Local environmental context:cave [ENVO:00000067]
Sample source:Tular Cave Laboratory, Slovenia
Sample material processing:Specimens were stored in 75% ethanol. Larval and juvenile samples were stained with contrast agent 1% phosphotungstic acid (PTA) in 90% methanol for seven weeks.
Tissue:Head [UBERON:0000033]
Collection date:2007
Exp-Scan method:MicroCT
Exp-Scanner:GE Phoenix v|tome|x L 240
Exp-Scan parameters:Acceleration voltage of the X-ray tube 60 kV; Tube current 200 μA; Exposure time 900 ms; 2000 images
Exp-Scan resolution:5.8 µm (isotropic)
Comment:The approval for the capture, handling, maintenance and breeding in captivity of the animals used in the study was granted by the Ministry of the Environment and Spatial Planning of the Republic of Slovenia, Slovenian Agency for the Environment (Permits nos. 35701-36/01, 35601-95/2009-4 and 35601-132/2014-4), by the Italian Republic, Friuli Venezia Giulia Region (Permit nos. 4105/6MU4/95/04/12), and by the Italian Republic, Ministry of Ecological Transition (Permits nos. 3006/015590-93, 39/04). No animals were sacrificed for this study.
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